Data Analysis, Bio-Statistics, Bio-Mathematics

[1] A New Quantitative Approach to Tree Attributes Estimation Based on LiDAR Point Clouds

Guangpeng Fan Liangliang Nan Feixiang Chen Yanqi Dong Zhiming Wang Hao Li Danyu Chen

Geometric Analysis and Geometric Topology Geometric Modeling and Processing Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:2106.15004

Remote Sensing, 12, (11), 1779, 2020.6
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[2] Assessing the Transmissibility of the New SARS-CoV-2 Variants: From Delta to Omicron

Rui Dong Yau Mathematical Sciences Center, Tsinghua University, Beijing, China; Yanqi Lake Beijing Institute of Mathematical Sciences and Applications, Beijing, China Taojun Hu Department of Biostatistics, School of Public Health, Peking University, Beijing 100191, China Yunjun Zhang Department of Biostatistics, School of Public Health, Peking University, Beijing 100191, China Yang Li Chongqing School, University of Chinese Academy of Sciences, Chongqing 400020, China Xiao-Hua Zhou Department of Biostatistics, School of Public Health, Peking University, Beijing 100191, China; Beijing International Center for Mathematical Research, Peking University, Beijing 100191, China

Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:2204.42002

Vaccines, 10, (4), 496, 2022.3
[ Download ] [ 2022-04-28 14:41:45 uploaded by dongrui ] [ 4151 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[3] AdQSM: A New Method for Estimating Above-Ground Biomass from TLS Point Clouds

Guangpeng Fan Liangliang Nan Yanqi Dong Xiaohui Su Feixiang Chen

Geometric Analysis and Geometric Topology Geometric Modeling and Processing Data Analysis, Bio-Statistics, Bio-Mathematics Data Analysis mathscidoc:2106.15006

Remote Sensing, 12, 3089, 2020.9
[ Download ] [ 2021-06-21 15:33:55 uploaded by liangliangnan ] [ 3388 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[4] Mathematical modeling of vertebrate limb development

Yong-Tao Zhang University of Notre Dame Mark S. Alber University of Notre Dame Stuart A. Newman New York Medical College

Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:1703.42004

Mathematical Biosciences, 243, 1-17, 2013
[ Download ] [ 2017-03-13 22:08:27 uploaded by ytzhangND ] [ 2138 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[5] Wave-Shape Function Analysis: When Cepstrum Meets Time–Frequency Analysis

Chen-Yun Lin University of Toronto Li Su Academia Sinica Hau-Tieng Wu University of Toronto

Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:1704.42001

Distinguished Paper Award in 2018

Journal of Fourier Analysis and Applications , 2017.2
[ Download ] [ 2017-04-24 23:39:53 uploaded by cylin ] [ 1625 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[6] Mapping transcriptomic vector fields of single cells

Xiaojie Qiu Whitehead Institute for Biomedical Research, Cambridge, MA, USA Yan Zhang Department of Computational and System Biology, University of Pittsburgh, Pittsburgh, PA, USA Jorge D. Martin-Rufino Broad Institute of MIT and Harvard, Cambridge, MA, USA Chen Weng Whitehead Institute for Biomedical Research, Cambridge, MA, USA Shayan Hosseinzadeh Department of Molecular and Cell Biology, University of California, Berkeley, CA, USA Jianhua Xing Department of Computational and System Biology, University of Pittsburgh, Pittsburgh, PA, USA Jonathan Weissman Whitehead Institute for Biomedical Research, Cambridge, MA, USA

Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:2202.42001

Cell, 185, 690-711, 2022.2
[ Download ] [ 2022-02-24 06:14:43 uploaded by yaz62 ] [ 1470 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[7] Graph connection laplacian methods can be made robust to noise

Noureddine El Karoui UC Berkeley Hau-tieng Wu University of Toronto

Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:1704.42002

Distinguished Paper Award in 2018

2016
[ Download ] [ 2017-04-29 11:10:13 uploaded by hauwu ] [ 1424 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[8] Continuity Scaling: A Rigorous Framework for Detecting and Quantifying Causality Accurately

Xiong Ying Fudan University Si-Yang Leng Fudan University Huan-Fei Ma Soochow University Qing Nie University of California, Irvine Ying-Cheng Lai Arizona State University Wei Lin Fudan University

Dynamical Systems Data Analysis, Bio-Statistics, Bio-Mathematics Data Analysis mathscidoc:2207.11002

RESEARCH, 2022, 9870149, 2022.5
[ Download ] [ 2022-07-31 15:14:15 uploaded by wlinfudan ] [ 1353 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[9] Persistent spectral graph

Rui Wang Michigan State University Duc Duy Nguyen University of Kentucky Guowei Wei Michigan State University

Combinatorics Data Analysis, Bio-Statistics, Bio-Mathematics Algebraic Topology and General Topology mathscidoc:2103.06001

Int J Numer Meth Biomed Engng, 36, 2020.4
[ Download ] [ 2021-03-04 12:07:08 uploaded by wangru25 ] [ 1206 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[10] Virus Database and Online Inquiry System Based on Natural Vectors

Rui Dong Tsinghua University Hui Zheng The University of Illinois at Chicago Kun Tian Tsinghua University Shek-Chung Yau The Hong Kong University of Science and Technology Weiguang Mao Tsinghua University Wenping Yu Nankai University Changchuan Yin The University of Illinois at Chicago Chenglong Yu South Australian Health and Medical Research Institute Rong Lucy He Chicago State University Jie Yang The University of Illinois at Chicago Stephen S.-T Yau Tsinghua University

Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:1903.42004

Evolutionary Bioinformatics, 13, 1-7, 2017.10
[ Download ] [ 2019-03-18 10:27:40 uploaded by RuiDong ] [ 1115 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[11] Full Chromosomal Relationships Between Populations and the Origin of Humans

Rui Dong Yau Mathematical Sciences Center, Tsinghua University, Beijing, China; Yanqi Lake Beijing Institute of Mathematical Sciences and Applications, Beijing, China Shaojun Pei Department of Mathematical Sciences, Tsinghua University, Beijing, China Mengcen Guan Department of Mathematical Sciences, Tsinghua University, Beijing, China Shek-Chung Yau Information Technology Services Center, The Hong Kong University of Science and Technology, Kowloon, Hong Kong, China Changchuan Yin Department of Mathematics, Statistics and Computer Science, University of Illinois at Chicago, Chicago, IL, United States Rong L. He Department of Biological Sciences, Chicago State University, Chicago, IL, United States Stephen S.-T. Yau Department of Mathematical Sciences, Tsinghua University, Beijing, China; Yanqi Lake Beijing Institute of Mathematical Sciences and Applications, Beijing, China

Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:2204.42001

Frontiers in Genetics, 12, 828805, 2022.2
[ Download ] [ 2022-04-28 14:34:20 uploaded by dongrui ] [ 1101 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[12] A new method to cluster genomes based on cumulative Fourier power spectrum

Rui Dong Tsinghua University Ziyue Zhu Tsinghua University Changchuan Yin University of Illinois at Chicago Rong L. He Chicago State University Stephen S.-T. Yau Tsinghua University

Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:1903.42005

Gene, 673, 2018.6
[ Download ] [ 2019-03-18 10:32:15 uploaded by RuiDong ] [ 1030 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[13] Convex hull analysis of evolutionary and phylogenetic relationships between biological groups

Kun Tian Tsinghua University Xin Zhao Tsinghua University Stephen S.-T. Yau Tsinghua University

Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:1904.42005

[ Download ] [ 2019-04-27 22:39:44 uploaded by zhaox15 ] [ 1023 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[14] Zika and Flaviviruses Phylogeny Based on the Alignment-Free Natural Vector Method

Yongkun Li Department of Mathematical Sciences, Tsinghua University Lily He Department of Mathematical Sciences, Tsinghua University Rong Lucy He Department of Biological Sciences, Chicago State University Stephen S.-T. Yau(Corresponding Department of Mathematical Sciences, Tsinghua University

Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:1903.42003

Dna & Cell Biology, 36, (2), 1-8, 2017
[ Download ] [ 2019-03-15 15:03:30 uploaded by hell16 ] [ 949 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[15] A new method for studying the evolutionary origin of the SAR11 clade marine bacteria

Xin Zhao Tsinghua University Xiaogeng Wan Tsinghua University Rong L.He Chicago State University Stephen S.-T. Yau Tsinghua University

Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:1611.13004

Molecular Phylogenetics and Evolution, 98, 271-279, 2016.5
[ Download ] [ 2016-11-25 19:58:36 uploaded by zhaox15 ] [ 938 downloads ] [ 0 comments ] [ Cited by 1 ] [ Abstract ] [ Full ]
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[16] Randomly distributed embedding making short-term high-dimensional data predictable

Huanfei Man Soochow University Siyang Leng Fudan University Kazuyuki Aihara Tokyo University Wei Lin Fudan University Luonan Chen Shanghai Institute of Biochemistry and Cell Biology, Chinese Academy of Sciences

Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:1904.42006

Best Paper Award in 2019

Proceedings of the National Academy of Sciences of the United States of America, 115, (43), E9994-E10002, 2018.10
[ Download ] [ 2019-04-28 19:34:56 uploaded by wlinfudan ] [ 931 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[17] DFA7, a New Method to Distinguish between Intron-Containing and Intronless Genes

Chenglong Yu South Australian Health and Medical Research Institute Mo Deng Lu Zheng Rong Lucy He Jie Yang Stephen S.-T. Yau

Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:1703.42003

PLoS ONE, 2014
[ Download ] [ 2017-03-13 20:56:51 uploaded by yclong8848 ] [ 827 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[18] Real Time Classification of Viruses in 12 Dimensions

Chenglong Yu South Australian Health and Medical Research Institute Troy Hernandez Hui Zheng Shek-Chung Yau Hsin-Hsiung Huang Rong Lucy He Jie Yang Stephen S.-T. Yau

Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:1703.42002

PLoS ONE, 2013
[ Download ] [ 2017-03-13 20:54:32 uploaded by yclong8848 ] [ 826 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[19] Whole genome single nucleotide polymorphism genotyping of Staphylococcus aureus

Changchuan Yin University of Illinois at Chicago Stephen S.-T. Yau Tsinghua University

Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:1908.42001

2019.1
[ Download ] [ 2019-08-21 02:42:56 uploaded by cyinbox ] [ 820 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[20] A novel strategy for clustering major depression individuals using whole-genome sequencing variant data

Chenglong Yu South Australian Health and Medical Research Institute Bernhard T. Baune University of Adelaide Julio Licinio South Australian Health and Medical Research Institute Ma-Li Wong South Australian Health and Medical Research Institute

Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:1703.42005

Scientific Reports, 7, (44389), 2017
[ Download ] [ 2017-03-14 08:37:18 uploaded by yclong8848 ] [ 805 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[21] A novel alignment-free vector method to cluster protein sequences

Lily He Department of Mathematical Sciences, Tsinghua University Yongkun Li Department of Mathematical Sciences, Tsinghua University Rong Lucy He Department of Biological Sciences, Chicago State University Stephen S.-T. Yau(Corresponding author) Department of Mathematical Sciences, Tsinghua University

Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:1903.42001

Journal of Theoretical Biology, 427, 41-52, 2017.6
[ Download ] [ 2019-03-15 14:50:00 uploaded by hell16 ] [ 805 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[22] AdTree: Accurate, Detailed, and Automatic Modelling of Laser-Scanned Trees

Shenglan Du TU Delft Roderik Lindenbergh Hugo Ledoux Jantien Stoter Liangliang Nan

Geometric Analysis and Geometric Topology Geometric Modeling and Processing Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:2106.15002

2019.9
[ Download ] [ 2021-06-21 15:17:39 uploaded by liangliangnan ] [ 793 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[23] Protein space: A natural method for realizing the nature of protein universe

Chenglong Yu South Australian Health and Medical Research Institute Mo Deng Shiu-Yuen Cheng Shek-Chung Yau Rong L. He Stephen S.-T. Yau

Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:1703.42001

Journal of Theoretical Biology, 318, 197-204, 2013
[ Download ] [ 2017-03-13 20:50:42 uploaded by yclong8848 ] [ 782 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[24] An age-structured continuum model for myxobacteria

Pierre Degond Imperial College London Angelika Manhart New York University Hui Yu Tsinghua University

Fluid Dynamics and Shock Waves Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:1906.14001

Mathematical Models and Methods in Applied Sciences, 28, (9), 1737–1770, 2018
[ Download ] [ 2019-06-26 11:22:58 uploaded by HuiYu ] [ 750 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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[25] Large-Scale Genome Comparison Based on Cumulative Fourier Power and Phase Spectra: Central Moment and Covariance Vector

Shaojun Pei Department of Mathematical Sciences, Tsinghua University, Beijing, PR China Rui Dong Department of Mathematical Sciences, Tsinghua University, Beijing, PR China Rong Lucy He Department of Biological Sciences, Chicago State University, Chicago, IL 60628, USA Stephen S.-T. Yau Department of Mathematical Sciences, Tsinghua University, Beijing, PR China

Data Analysis, Bio-Statistics, Bio-Mathematics mathscidoc:1909.42001

Computational and Structural Biotechnology Journal, 17, 982-994, 2019.7
[ Download ] [ 2019-09-04 17:31:31 uploaded by Stephenyau ] [ 749 downloads ] [ 0 comments ] [ Abstract ] [ Full ]
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