Frequentists' inference often delivers point estimators associated with condence intervals or sets for parameters of interest. Constructing the condence intervals or sets requires understanding the sampling distributions of the point estimators, which, in many but not all cases, are related to asymptotic Normal distributions ensured by central limit theorems. Although previous literature has established various forms of central limit theorems for statistical inference in super population models, we still need general and convenient forms of central limit theorems for some randomization-based causal analysis of experimental data, where the parameters of interests are functions of a nite population and randomness comes solely from the treatment assignment. We use central limit theorems for sample surveys and rank statistics to establish general forms of the nite population central limit theorems that are particularly useful for proving asymptotic distributions of randomization tests under the sharp null hypothesis of zero individual causal eects, and for obtaining the asymptotic repeated sampling distributions of the causal eect estimators. The new central limit theorems hold for general experimental designs with multiple treatment levels, multiple treatment factors and vector outcomes, and are immediately applicable for studying the asymptotic properties of many methods in causal inference, including instrumental variable, regression adjustment, rerandomization, clustered randomized experiments, and so on. Previously, the asymptotic properties of these problems are often based on heuristic arguments, which in fact rely on general forms of nite population central limit theorems that have not been established before. Our new theorems ll in this gap by providing more solid theoretical foundation for asymptotic randomization-based causal inference.

Due to vast sequence divergence among different viral groups, sequence alignment is not directly applicable to genome-wide comparative analysis of viruses. More and more attention has been paid to alignment-free methods for whole genome comparison and phylogenetic tree reconstruction. Among alignment-free methods, the recently proposed ‘‘Natural Vector (NV) representation” has successfully been used to study the phylogeny of multi-segmented viruses based on a 12-dimensional genome space derived from the nucleotide sequence structure. But the preference of proteomes over genomes for the determination of viral phylogeny was not deeply investigated. As the translated products of genes, proteins directly form the shape of viral structure and are vital for all metabolic pathways. In this study, using the NV representation of a protein sequence along with the Hausdorff distance suitable to compare point sets, we construct a 60-dimensional protein space to analyze the evolutionary relationships of 4021 viruses by whole-proteomes in the current NCBI Reference Sequence Database (RefSeq). We also take advantage of the previously developed natural graphical representation to recover viral phylogeny. Our results demonstrate that the proposed method is efficient and accurate for classifying viruses. The accuracy rates of our predictions such as for Baltimore II viruses are as high as 95.9% for family labels, 95.7% for subfamily labels and 96.5% for genus labels. Finally, we discover that proteomes lead to better viral classification when reliable protein sequences are abundant. In other cases, the accuracy rates using proteomes are still comparable to that of genomes.

This paper deals with the estimation of a high-dimensional covariance with a con- ditional sparsity structure and fast-diverging eigenvalues. By assuming sparse error covariance matrix in an approximate factor model, we allow for the presence of some cross-sectional correlation even after taking out common but unobservable factors. We introduce the Principal Orthogonal complEment Thresholding (POET) method to explore such an approximate factor structure with sparsity. The POET estimator includes the sample covariance matrix, the factor-based covariance matrix (Fan, Fan, and Lv, 2008), the thresholding estimator (Bickel and Levina, 2008) and the adaptive thresholding estimator (Cai and Liu, 2011) as specic examples. We provide mathe- matical insights when the factor analysis is approximately the same as the principal component analysis for high-dimensional data. The rates of convergence of the sparse residual covariance matrix and the conditional sparse covariance matrix are studied under various norms. It is shown that the impact of estimating the unknown factors vanishes as the dimensionality increases. The uniform rates of convergence for the un- observed factors and their factor loadings are derived. The asymptotic results are also veried by extensive simulation studies. Finally, a real data application on portfolio allocation is presented.

In deconvolution in R^d, d≥1, with mixing density p(∈\mathscr{P}) and kernel h, the mixture density f_p(∈\mathscr{F}_p) is estimated with MDE f_{\hat{p}n}, having upper L1-error rate, an, in probability or in risk; \hat{p}_n∈\mathscr{P}. In one application, \mathscr{P} consists of L1-separable densities in R with differences changing sign at most J times and h(x−y) Totally Positive. When h is known and p is \tilde{q}-smooth, vanishing outside a compact in R^d, plug-in upper bounds are provided for the L2-error rate of \hat{p}_n and its [s]-th mixed partial derivative \hat{p}^{(s)}_n, via ∥f_{\hat{p}_n}−f_p∥_1, with rates (log a^{−1}_n)^{−N_1} and a^{N_2}_n, respectively, for h super-smooth and smooth; \tilde{q}∈R^+, [s] ≤ \tilde{q}, d≥1, N_1>0, N_2>0. For a_n ∼ (logn)^ζ⋅(n^{−δ}), the former rate is optimal for any δ>0 and the latter misses the optimal by the factor (logn)^ξ when δ=.5; ζ>0, ξ>0. N_1 and N_2 appear in optimal rates and lower error and risk bounds in the deconvolution literature.

For multiple index models, it has recently been shown that the sliced inverse regression (SIR) is consistent for estimating the sufficient dimension reduction (SDR) subspace if and only if the dimension p and sample size n satisfies that ρ=limp/n=0. Thus, when p is of the same or a higher order of n, additional assumptions such as sparsity have to be imposed in order to ensure consistency for SIR. By constructing artificial response variables made up from top eigenvectors of the estimated conditional covariance matrix, \widehat{var(𝔼[x|y])}, we introduce a simple Lasso regression method to obtain an estimate of the SDR subspace. The resulting algorithm, Lasso-SIR, is shown to be consistent and achieve the optimal convergence rate under certain sparsity conditions when p is of order o(n^2λ^2) where λ is the generalized signal noise ratio. We also demonstrate the superior performance of Lasso-SIR compared with existing approaches via extensive numerical studies and several real data examples.