We construct a virus database called VirusDB (http://yaulab.math.tsinghua.edu.cn/VirusDB/) and an online inquiry system to serve people who are interested in viral classification and prediction. The database stores all viral genomes, their corresponding natural vectors, and the classification information of the single/multiple-segmented viral reference sequences downloaded from National Center for Biotechnology Information. The online inquiry system serves the purpose of computing natural vectors and their distances based on submitted genomes, providing an online interface for accessing and using the database for viral classification and prediction, and back-end processes for automatic and manual updating of database content to synchronize with GenBank. Submitted genomes data in FASTA format will be carried out and the prediction results with 5 closest neighbors and their classifications will be returned by email. Considering the one-to-one correspondence between sequence and natural vector, time efficiency, and high accuracy, natural vector is a significant advance compared with alignment methods, which makes VirusDB a useful database in further research.

No abstract uploaded!

In this paper, we investigate the topology of a class of non-Kähler compact complex manifolds generalizing that of Hopf and Calabi-Eckmann manifolds. These manifolds are diffeomorphic to special systems of real quadrics$C$^{$n$}which are invariant with respect to the natural action of the real torus ($S$^{1})^{$n$}onto$C$^{$n$}. The quotient space is a simple convex polytope. The problem reduces thus to the study of the topology of certain real algebraic sets and can be handled using combinatorial results on convex polytopes. We prove that the homology groups of these compact complex manifolds can have arbitrary amount of torsion so that their topology is extremely rich. We also resolve an associated wall-crossing problem by introducing holomorphic equivariant elementary surgeries related to some transformations of the simple convex polytope. Finally, as a nice consequence, we obtain that affine non-Kähler compact complex manifolds can have arbitrary amount of torsion in their homology groups, contrasting with the Kähler situation.

No abstract uploaded!

No abstract uploaded!