Homology theory relative to classes of objects other than those of projective or injective objects in abelian categories has been widely studied in the last years, giving a special relevance to Gorenstein homological algebra. We prove the existence of Gorenstein flat precovers in any locally finitely presented Grothendieck category in which the class of flat objects is closed under extensions, the existence of Gorenstein injective preenvelopes in any locally noetherian Grothendieck category in which the class of all Gorenstein injective objects is closed under direct products, and the existence of special Gorenstein injective preenvelopes in locally noetherian Grothendieck categories with a generator lying in the left orthogonal class to that of Gorenstein injective objects.

Let V be a vertex operator algebra with a category C of (generalized) modules that has vertex tensor category structure, and thus braided tensor category structure, and let A be a vertex operator (super)algebra extension of V. We employ tensor categories to study untwisted (also called local) A-modules in C, using results of Huang-Kirillov-Lepowsky showing that A is a (super)algebra object in C and that generalized A-modules in C correspond exactly to local modules for the corresponding (super)algebra object. Both categories, of local modules for a C-algebra and (under suitable conditions) of generalized A-modules, have natural braided monoidal category structure, given in the first case by Pareigis and Kirillov-Ostrik and in the second case by Huang-Lepowsky-Zhang. Our main result is that the Huang-Kirillov-Lepowsky isomorphism of categories between local (super)algebra modules and extended vertex operator (super)algebra modules is also an isomorphism of braided monoidal (super)categories. Using this result, we show that induction from a suitable subcategory of V-modules to A-modules is a vertex tensor functor. We give two applications. First, we derive Verlinde formulae for regular vertex operator superalgebras and regular (1/2)ℤ-graded vertex operator algebras by realizing them as (super)algebra objects in the vertex tensor categories of their even and ℤ-graded components, respectively. Second, we analyze parafermionic cosets C=Com(V_L,V) where L is a positive definite even lattice and V is regular. If the category of either V-modules or C-modules is understood, then our results classify all inequivalent simple modules for the other algebra and determine their fusion rules and modular character transformations. We illustrate both directions with several examples.

We prove that any “finite-type” component of a stability space of a triangulated category is contractible. The motivating example of such a component is the stability space of the Calabi–Yau–N category D(Gamma_N Q) associated to an ADE Dynkin quiver. In addition to showing that this is contractible we prove that the braid group Br(Q) acts freely upon it by spherical twists, in particular that the spherical twist group Br(Gamma_N Q) is isomorphic to Br(Q). This generalises the result of Brav–Thomas for the N=2 case. Other classes of triangulated categories with finite-type components in their stability spaces include locally finite triangulated categories with finite-rank Grothendieck group and discrete derived categories of finite global dimension.

In this paper, we introduce multiscale persistent functions for biomolecular structure characterization. The essential idea is to combine our multiscale rigidity functions with persistent homology analysis, so as to construct a series of multiscale persistent functions, particularly multiscale persistent entropies, for structure characterization. To clarify the fundamental idea of our method, the multiscale persistent entropy model is discussed in great detail. Mathematically, unlike the previous persistent entropy or topological entropy, a special resolution parameter is incorporated into our model. Various scales can be achieved by tuning its value. Physically, our multiscale persistent entropy can be used in conformation entropy evaluation. More specifically, it is found that our method incorporates in it a natural classification scheme. This is achieved through a density filtration of a multiscale rigidity function built from bond and/or dihedral angle distributions. To further validate our model, a systematical comparison with the traditional entropy evaluation model is done. It is found that our model is able to preserve the intrinsic topological features of biomolecular data much better than traditional approaches, particularly for resolutions in the mediate range. Moreover, our method can be successfully used in protein classification. For a test database with around nine hundred proteins, a clear separation between all-alpha and all-beta proteins can be achieved, using only the dihedral and pseudo-bond angle information. Finally, a special protein structure index (PSI) is proposed, for the first time, to describe the "regularity" of protein structures. Essentially, PSI can be used to describe the "regularity" information in any systems.

We show that direct limit completions of vertex tensor categories inherit vertex and braided tensor category structures, under conditions that hold for example for all known Virasoro and affine Lie algebra tensor categories. A consequence is that the theory of vertex operator (super)algebra extensions also applies to infinite-order extensions. As an application, we relate rigid and non-degenerate vertex tensor categories of certain modules for both the affine vertex superalgebra of osp(1|2) and the N=1 super Virasoro algebra to categories of Virasoro algebra modules via certain cosets.