We develop a new algorithm to automatically register hippocampal (HP) surfaces with complete geometric matching, avoiding the need to manually label landmark features. A good registration depends on a reasonable choice of shape energy that measures the dissimilarity between surfaces. In our work, we first propose a complete shape index using the Beltrami coefficient and curvatures, which measures subtle local differences. The proposed shape energy is zero if and only if two shapes are identical up to a rigid motion. We then seek the best surface registration by minimizing the shape energy. We propose a simple representation of surface diffeomorphisms using Beltrami coefficients, which simplifies the optimization process. We then iteratively minimize the shape energy using the proposed Beltrami Holomorphic flow (BHF) method. Experimental results on 212 HP of normal and diseased (Alzheimer's disease) subjects show our proposed algorithm is effective in registering HP surfaces with complete geometric matching. The proposed shape energy can also capture local shape differences between HP for disease analysis.

We address the problem of surface inpainting, which aims to fill in holes or missing regions on a Riemann surface based on its surface geometry. In practical situation, surfaces obtained from range scanners often have holes where the 3D models are incomplete. In order to analyze the 3D shapes effectively, restoring the incomplete shape by filling in the surface holes is necessary. In this paper, we propose a novel conformal approach to inpaint surface holes on a Riemann surface based on its surface geometry. The basic idea is to represent the Riemann surface using its conformal factor and mean curvature. According to Riemann surface theory, a Riemann surface can be uniquely determined by its conformal factor and mean curvature up to a rigid motion. Given a Riemann surface S, its mean curvature H and conformal factor λ can be computed easily through its conformal parameterization. Conversely, given λ and H, a Riemann surface can be uniquely reconstructed by solving the Gauss-Codazzi equation on the conformal parameter domain. Hence, the conformal factor and the mean curvature are two geometric quantities fully describing the surface. With this λ-H representation of the surface, the problem of surface inpainting can be reduced to the problem of image inpainting of λ and H on the conformal parameter domain. Once λ and H are inpainted, a Riemann surface can be reconstructed which effectively restores the 3D surface with missing holes. Since the inpainting model is based on the geometric quantities λ and H, the restored surface follows the surface geometric pattern. We test the proposed algorithm on synthetic data as well as real surface data. Experimental results show that our proposed method is an effective surface inpainting algorithm to fill in surface holes on an incomplete 3D models based their surface geometry.

Texture mapping and texture synthesis are two popular methods for the decoration of surfaces with visual detail. Here, an existing challenge is to preserve, or at least balance, two competing metrics: scale and angle. In this paper we present two methods for this, both based on global conformal parameterization. First, we describe a texture synthesis algorithm for surfaces with arbitrary topology. By using the conformal parameterization, the 3D surface texture synthesis problem can be converted to a 2D image synthesis problem, which is more intuitive, easier, and conceptually simpler. While the conformality of the parameterization naturally preserves the angles of the texture, in this paper we provide a multi-scale technique to also maintain a more uniform area scaling factor. A second novel contribution is to employ the global parameterization to simultaneously preserve orthogonality and size in texture

Structured light system using a digital video projector is increasingly used for a 3-D shape measurement because of its digital nature. However, the nonlinear gamma of the projector causes the projected fringe patterns to be non-sinusoidal, which results in phase error therefore shape measurement error. Previous work showed that, by using a small look-up-table (LUT), this type of phase error can be reduced significantly for a three-step phase-shifting algorithm. In this research, we prove that this type of phase error compensation method is not limited to a three-step phase-shifting algorithm. It is generic for any phase-shifting algorithm. The phase error compensation algorithm is able to theoretically eliminate the phase error caused by the gamma of the projector completely. It is based on our finding that in phase domain, the phase error due to the projector's gamma is preserved for arbitrary object's surface

Computing geodesic distances on triangle meshes is a fundamental problem in computational geometry and computer graphics. To date, two notable classes of algorithms, the Mitchell-Mount-Papadimitriou (MMP) algorithm and the Chen-Han (CH) algorithm, have been proposed. Although these algorithms can compute exact geodesic distances if numerical computation is exact, they are computationally expensive, which diminishes their usefulness for large-scale models and/or time-critical applications. In this paper, we propose the fast wavefront propagation (FWP) framework for improving the performance of both the MMP and CH algorithms. Unlike the original algorithms that propagate only a single window (a data structure locally encodes geodesic information) at each iteration, our method organizes windows with a bucket data structure so that it can process a large number of windows simultaneously without compromising wavefront quality. Thanks to its macro nature, the FWP method is less sensitive to mesh triangulation than the MMP and CH algorithms. We evaluate our FWP-based MMP and CH algorithms on a wide range of large-scale real-world models. Computational results show that our method can improve the speed by a factor of 3-10.