Multiple hypothesis testing is a fundamental problem in high dimensional inference, with wide applications in many scientific fields. In genome-wide association studies, tens of thousands of tests are performed simultaneously to find if any genes are associated with some traits and those tests are correlated. When test statistics are correlated, false discovery control becomes very challenging under arbitrary dependence. In the current paper, we propose a new methodology based on principal factor approximation, which successfully substracts the common dependence and weakens significantly the correlation structure, to deal with an arbitrary dependence structure. We derive the theoretical distribution for false discovery proportion (FDP) in large scale multiple testing when a common threshold is used and provide a consistent FDP. This result has important applications in controlling FDR and FDP. Our estimate of FDP compares favorably with Efron (2007)'s approach, as demonstrated by in the simulated examples. Our approach is further illustrated by some real data applications.

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We examine the effect of errors in covariates in nonparametric function estimation. These functions include densities, regressions and conditional quantiles. To estimate these functions, we use the idea of deconvoluting kernels in conjunction with the ordinary kernel methods. We also discuss a new class of function estimators based on local polynomials.

Two measures of sensitivity to initial conditions in nonlinear time series are proposed. The notions give some insight into the relationship between the Fisher information in statistical estimation and initial-value sensitivity in dynamical systems. By using the locally polynomial regression, we develop nonparametric estimates for a conditional density function, its square root and its partial derivatives. The proposed procedures are innovative and of interests in their own right. They are also used to estimate the sensitive measures. The asymptotic normality of the proposed estimators have been proved. We also propose a simple and intuitively appealing method for choosing the bandwidths. Two simulated examples are used as illustrations.

Most papers on high-dimensional statistics are based on the assumption that none of the regressors are correlated with the regression error, namely, they are exogeneous. Yet, endogeneity arises easily in high-dimensional regression due to a large pool of regressors and this causes the inconsistency of the penalized least-squares methods and possible false scientific discoveries. A necessary condition for model selection of a very general class of penalized regression methods is given, which allows us to prove formally the inconsistency claim. To cope with the possible endogeneity, we construct a novel penalized focussed generalized method of moments (FGMM) criterion function and offer a new optimization algorithm. The FGMM is not a smooth function. To establish its asymptotic properties, we first study the model selection consistency and an oracle property for a general class of penalized regression methods. These results are then used to show that the FGMM possesses an oracle property even in the presence of endogenous predictors, and that the solution is also near global minimum under the over-identification assumption. Finally, we also show how the semi-parametric efficiency of estimation can be achieved via a two-step approach.