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Comparing DNA and protein sequence groups plays an important role in biological evolutionary relationship research. Despite many methods available for sequence comparison, only a few can be used for group comparison. In this study, we propose a novel approach using convex hulls. We use statistical information contained within the sequences to represent each sequence as a point in high dimensional space. We find that the points belonging to one biological group are located in a different region of space than points belonging to other biological groups. To be more precise, the convex hull of the points from one group are disjoint from the convex hulls of points from other groups. This finding allows us to do phylogenetic analysis for groups in an efficient way. Five different theorems are presented for checking whether two convex hulls intersect or are disjoint. Test results for datasets related to HRV, HPV, Ebolavirus, PKC and protein phosphatase domains demonstrate that our method performs well and provides a new tool for studying group phylogeny. More significantly, the convex analysis presents a new way to search for sequences belonging to a biological group by examining points within the group’s convex hull.

We show the intersection of a compact almost complex subvariety of dimension 4 and a compact almost complex submanifold of codimension 2 is a J-holomorphic curve. This is a generalization of positivity of intersections for J-holomorphic curves in almost complex 4-manifolds to higher dimensions. As an application, we discuss pseudoholomorphic sections of a complex line bundle. We introduce a method to produce J-holomorphic curves using the differential geometry of almost Hermitian manifolds. When our main result is applied to pseudoholomorphic maps, we prove the singularity subset of a pseudoholomorphic map between almost complex 4-manifolds is J-holomorphic. Building on this, we show degree one pseudoholomorphic maps between almost complex 4-manifolds are actually birational morphisms in pseudoholomorphic category.

We study the periodic homogenization of first order front propagations. Based on PDE methods, we provide a simple proof that, for n ≥ 3, the class of centrally symmetric polytopes with rational coordinates and nonempty interior is admissible as effective fronts, which was also established by I. Babenko and F. Balacheff [Sur la forme de la boule unit\'e de la norme stable unidimensionnelle, Manuscripta Math. 119 (2006) 347--358] and M. Jotz [Hedlund metrics and the stable norm, Diff. Geometry Appl. 27 (2009) 543--550] in the form of stable norms as an extension of G. A. Hedlund's classical result [Geodesics on a two-dimensional Riemannian manifold with periodic coefficients, Ann. Math. 33 (1932) 719--739]. Besides, we obtain the optimal convergence rate of the homogenization problem for this class.

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