In this paper we study the geometry of manifolds with vector cross products and its complexification. First we develop the theory of instantons and branes and study their deformations. For example they are (i) holomorphic curves and Lagrangian submanifolds in symplectic manifolds and (ii) associative submanifolds and coassociative submanifolds in G2-manifolds. Second we classify K¨ahler manifolds with the complex analog of the vector cross product, namely they are Calabi-Yau manifolds and hyperk¨ahler manifolds. Furthermore we study instantons, Neumann branes and Dirichlet branes on these manifolds. For example they are special Lagrangian submanifolds with phase angle zero, complex hypersurfaces and special Lagrangian submanifolds with phase angle pi/2 in Calabi-Yau manifolds.

We propose a general method that parameterizes general surfaces with complex (possible branching) topology using Riemann surface structure. Rather than evolve the surface geometry to a plane or sphere, we instead use the fact that all orientable surfaces are Riemann surfaces and admit conformal structures, which induce special curvilinear coordinate systems on the surfaces. We can then automatically partition the surface using a critical graph that connects zero points in the global conformal structure on the surface. The trajectories of iso-parametric curves canonically partition a surface into patches. Each of these patches is either a topological disk or a cylinder and can be conformally mapped to a parallelogram by integrating a holomorphic I-form defined on the surface. The resulting surface subdivision and the parameterizations of the components are intrinsic and stable. For surfaces with similar topology

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We prove that the first Chern form of the moduli space of polarized Calabi-Yau manifolds, with the Hodge metric or the Weil-Petersson metric, represent the first Chern class of the canonical extensions of the tangent bundle to the compactification of the moduli space with normal crossing divisors.

We construct a generalized Witten genus for spinc manifolds, which takes values in level 1 modular forms with integral Fourier expansion on a class of spinc manifolds called stringc manifolds. We also construct a mod 2 analogue of the Witten genus for 8k+2 dimensional spin manifolds. The Landweber-Stong type vanishing theorems are proven for the generalizedWitten genus and the mod 2 Witten genus on stringc and string (generalized) complete intersections in (product of) complex projective spaces respectively.