In this paper, we develop the Hamiltonian conservative and L2 conservative local discontinuous Galerkin (LDG) schemes for the Korteweg-de Vries (KdV) type equations with the minimal stencil. For the time discretization, we adopt the semi- implicit spectral deferred correction (SDC) method to achieve the high order accuracy and efficiency. Also we compare the schemes with the dissipative LDG scheme. Stabil- ity of the fully discrete schemes is provided by Fourier analysis for the linearized KdV equation. Numerical examples are shown to illustrate the capability of these schemes. Compared with the dissipative LDG scheme, the numerical simulations also indicate that the conservative LDG scheme with high order time discretization can reduce the long time phase error validly.

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Zika virus (ZIKV) is a mosquito-borne flavivirus. It was first isolated from Uganda in 1947 and has become an emergent event since 2007. However, because of the inconsistency of alignment methods, the evolution of ZIKV remains poorly understood. In this study, we first use the complete protein and an alignment-free method to build a phylogenetic tree of 87 Zika strains in which Asian, East African, and West African lineages are characterized. We also use the NS5 protein to construct the genetic relationship among 44 Zika strains. For the first time, these strains are divided into two clades: African 1 and African 2. This result suggests that ZIKV originates from Africa, then spread to Asia, Pacific islands, and throughout the Americas. We also perform the phylogeny analysis for 53 viruses in genus Flavivirus to which ZIKV belongs using complete proteins. Our conclusion is consistent with the classification by the hosts and transmission vectors.

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