This paper studies affine Deligne-Lusztig varieties $X_{w}(b)$ in the affine flag variety of a quasi-split tamely ramified group. We describe the geometric structure of $X_{w}(b)$ for a minimal length element $w$ in the conjugacy class of an extended affine Weyl group, generalizing one of the main results in \cite{HL} to the affine case. We then provide a reduction method that relates the structure of $X_{w}(b)$ for arbitrary elements $w$ in the extended affine Weyl group to those associated with minimal length elements. Based on this reduction, we establish a connection between the dimension of affine Deligne-Lusztig varieties and the degree of the class polynomial of affine Hecke algebras. As a consequence, we prove a conjecture of G\"ortz, Haines, Kottwitz and Reuman in \cite{GHKR}.

We explore the fine structure of the holographic entanglement entropy proposal (the Ryu-Takayanagi formula) in AdS$_3$/CFT$_{2}$. With the guidance from the boundary and bulk modular flows we find a natural slicing of the entanglement wedge with the modular planes, which are co-dimension one bulk surfaces tangent to the modular flow everywhere. This gives an one-to-one correspondence between the points on the boundary interval $\mathcal{A}$ and the points on the Ryu-Takayanagi (RT) surface $\mathcal{E}_{\mathcal{A}}$. In the same sense an arbitrary subinterval $\mathcal{A}_2$ of $\mathcal{A}$ will correspond to a subinterval $\mathcal{E}_2$ of $\mathcal{E}_{\mathcal{A}}$. This fine correspondence indicates that the length of $\mathcal{E}_2$ captures the contribution $s_{\mathcal{A}}(\mathcal{A}_2)$ from $\mathcal{A}_2$ to the entanglement entropy $S_{\mathcal{A}}$, hence gives the contour function for entanglement entropy. Furthermore we propose that $s_{\mathcal{A}}(\mathcal{A}_2)$ in general can be written as a simple linear combination of entanglement entropies of single intervals inside $\mathcal{A}$. This proposal passes several non-trivial tests.

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We study period integrals of CY hypersurfaces in a partial flag variety. We construct a holonomic system of differential equations which govern the period integrals. By means of representation theory, a set of generators of the system can be described explicitly. The results are also generalized to CY complete intersections. The construction of these new systems of differential equations have lead us to the notion of a tautological system.

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