Here we propose a novel method to compute Teichmller shape space based shape index to study brain morphometry. Such a shape index is intrinsic, and invariant under conformal transformations, rigid motions and scaling. We conformally map a genus-zero open boundary surface to the Poincar disk with the Yamabe flow method. The shape indices that we compute are the lengths of a special set of geodesics under hyperbolic metric. Tests on longitudinal brain imaging data were used to demonstrate the stability of the derived feature vectors. In leave-one-out validation tests, we achieved 100% accurate classification (versus only 68% accuracy for volume measures) in distinguishing 11 HIV/AIDS individuals from 8 healthy control subjects, based on Teichmller coordinates for lateral ventricular surfaces extracted from their 3D MRI scans.

In this paper, we introduce a novel method that can generate a sequence of physical transformations between 3D models with different shape and topology. Feasible transformations are realized on a chain structure with connected components that are 3D printed. Collision-free motions are computed to transform between different configurations of the 3D printed chain structure. To realize the transformation between different 3D models, we first voxelize these input models into similar number of voxels. The challenging part of our approach is to generate a simple path --- as a chain configuration to connect most voxels. A layer-based algorithm is developed with theoretical guarantee of the existence and the path length. We find that collision-free motion sequence can always be generated when using a straight line as the intermediate configuration of transformation. The effectiveness of our method is demonstrated by both the simulation and the experimental tests taken on 3D printed chains.

3D surface classification is a fundamental problem in computer vision and computational geometry. Surfaces can be classified by different transformation groups. Traditional classification methods mainly use topological transformation groups and Euclidean transformation groups. We introduce a novel method to classify surfaces by conformal transformation groups. Conformal equivalent class is refiner than topological equivalent class and coarser than isometric equivalent class, making it suitable for practical classification purposes. For general surfaces, the gradient fields of conformal maps form a vector space, which has a natural structure invariant under conformal transformations. We present an algorithm to compute this conformal structure, which can be represented as matrices, and use it to classify surfaces. The result is intrinsic to the geometry, invariant to triangulation and insensitive to resolution. To the best