In this paper we present a new algorithm which turns an unstructured triangle mesh into a quad dominant mesh with edges well aligned to the principal directions of the underlying surface. Instead of computing a globally smooth parameterization or integrating curvature lines along a tangent vector field, we simply apply an iterative relaxation scheme which incrementally aligns the mesh edges to the principal directions. We further obtain the quad dominant mesh by dropping the not-aligned diagonal edges from the triangle mesh. A post-processing stage is introduced to further improve the results. The major advantage of our algorithm is its conceptual simplicity since it is merely based on elementary mesh operations such as edge collapse, flip, and split. Various results are presented in the paper; they show a good alignment to surface features and rather uniform distribution of mesh vertices. This makes them well suited, e.g., as CatmullClark Subdivision control meshes.

In this paper, we derive two subgradient estimates of the CR heat equation in a closed pseudohermitian 3-manifold which are served as the CR version of the Li-Yau gradient estimate. With its applications, we first get a subgradient estimate of the logarithm of the positive solution of the CR heat equation. Secondly, we have the Harnack inequality and upper bound estimate for the heat kernel. Finally, we obtain Perelman-type entropy formulae for the CR heat equation.

Comparing DNA and protein sequence groups plays an important role in biological evolutionary relationship research. Despite many methods available for sequence comparison, only a few can be used for group comparison. In this study, we propose a novel approach using convex hulls. We use statistical information contained within the sequences to represent each sequence as a point in high dimensional space. We find that the points belonging to one biological group are located in a different region of space than points belonging to other biological groups. To be more precise, the convex hull of the points from one group are disjoint from the convex hulls of points from other groups. This finding allows us to do phylogenetic analysis for groups in an efficient way. Five different theorems are presented for checking whether two convex hulls intersect or are disjoint. Test results for datasets related to HRV, HPV, Ebolavirus, PKC and protein phosphatase domains demonstrate that our method performs well and provides a new tool for studying group phylogeny. More significantly, the convex analysis presents a new way to search for sequences belonging to a biological group by examining points within the group’s convex hull.

In these notes, we provide an introduction to the hemisphere partition function of 2d (2, 2) supersymmetric gauge theories, and discuss its relation to the “D-brane central charge” which were studied in superstring theory, in 2d supersymmetric quantum field theory, and in topological string theory. We also discuss relation to “macroscopic loop” in matrix models. They are mostly reviews of the work by the authors, but contains some new results such as the partition function for a rotated supersymmetry as well as the differential equations.

The convergence to steady state solutions of the Euler equations for weighted compact nonlinear schemes (WCNS) [Deng X. and Zhang H. (2000), J. Comput. Phys. 165, 22-44 and Zhang S., Jiang S and Shu C.-W. (2008), J. Comput. Phys. 227, 7294-7321] is studied through numerical tests. Like most other shock capturing schemes, WCNS also suffers from the problem that the residue can not settle down to machine zero for the computation of the steady state solution which contains shock waves but hangs at the truncation error level. In this paper, the techniques studied in [Zhang S. and Shu. C.-W. (2007), J. Sci. Comput. 31, 273-305 and Zhang S., Jiang S and Shu. C.-W. (2011), J. Sci. Comput. 47, 216-238], to improve the convergence to steady state solutions for WENO schemes, are generalized to the WCNS. Detailed numerical studies in one and two dimensional cases are performed. Numerical tests demonstrate the effectiveness of these techniques when applied to WCNS. The residue of various order WCNS can settle down to machine zero for typical cases while the small post-shock oscillations can be removed.